Package: GSEMA
Type: Package
Title: Gene Set Enrichment Meta-Analysis
Version: 0.99.3
Authors@R: c(person("Juan Antonio", "Villatoro-García", role = c("aut", "cre"), email = "juanantoniovillatorogarcia@gmail.com"), person("Pablo", "Jurado-Bascón", role = "aut"), person("Pedro", "Carmona-Sáez", role = "aut"))
Description: Performing the different steps of gene set enrichment
        meta-analysis. It provides different functions that allow the
        application of meta-analysis based on the combination of effect
        sizes from different pathways in different studies to obtain
        significant pathways that are common to all of them.
License: GPL-2
Depends: R (>= 4.4)
Suggests: BiocStyle, qpdf, BiocGenerics, RUnit, knitr, rmarkdown
Imports: Biobase, limma, Rdpack, singscore, GSVA, progress, pbapply,
        doParallel, parallel, BiocParallel, metafor, RColorBrewer,
        pheatmap, methods, scales, plyr, grDevices, stats, impute
VignetteBuilder: knitr
biocViews: StatisticalMethod, GeneSetEnrichment, Pathways
RdMacros: Rdpack
Encoding: UTF-8
LazyData: false
RoxygenNote: 7.3.2
Config/pak/sysreqs: cmake make libmagick++-dev gsfonts libicu-dev
        libpng-dev libuv1-dev libxml2-dev libssl-dev zlib1g-dev
Repository: https://juananvg.r-universe.dev
Date/Publication: 2024-10-09 10:48:35 UTC
RemoteUrl: https://github.com/juananvg/gsema
RemoteRef: HEAD
RemoteSha: 47fa3b86b9475d0af5bea36b152ad83795c840f5
NeedsCompilation: no
Packaged: 2026-07-15 06:08:23 UTC; root
Author: Juan Antonio Villatoro-García [aut, cre],
  Pablo Jurado-Bascón [aut],
  Pedro Carmona-Sáez [aut]
Maintainer: Juan Antonio Villatoro-García <juanantoniovillatorogarcia@gmail.com>